How to calculate map units
Introduction
Map units are a method of measuring genetic distances, showing the relative positions of genes on a chromosome. They provide a representation of the recombination frequency between two genetic markers or genes. Understanding how to calculate map units is an essential skill for those studying genetics and molecular biology. This article will offer a comprehensive guide on calculating map units, starting with their origin in genetic linkage maps and ending with detailed examples and step-by-step procedures.
The Origin of Map Units: Genetic Linkage Maps
The concept of map units stems from the studies conducted by Thomas Hunt Morgan on the fruit fly, Drosophila melanogaster. Morgan discovered that genes were located on chromosomes and could be mapped based on their location relative to each other. This discovery led to the development of genetic linkage maps – diagrams showing the arrangement of genes along a chromosome.
Calculating Map Units: The Basics
Map units, also known as centimorgans (cM), are utilized in measuring genetic recombination frequencies. One map unit corresponds to a 1% chance of recombination occurrence between two markers or genes during meiosis – the process where cells divide to produce gametes. The primary technique used to calculate map units is by determining recombination frequencies (RF) between markers then converted into map units using the formula:
Map Units = RF * 100
Recombination Frequencies: Obtaining Data
To calculate recombination frequencies, researchers typically use data acquired from breeding experiments, specifically analyzing recombinant progeny – offspring displaying new combinations of traits not found in either parent. The recombination frequency is calculated as follows:
RF = (Number of recombinant progeny / Total number of progeny) * 100
Example and Step-by-Step Procedure for Calculating Map Units
1. Obtain data from breeding experiments: For this example, suppose we have data from an experiment showing the following:
– Parent 1: AABB
– Parent 2: aabb
2. Count the number of each offspring type produced by the experiment:
– Offspring type 1 (AAbb): 400
– Offspring type 2 (aaBB): 390
– Offspring type 3 (AaBb): 90
– Offspring type 4 (AaBB): 120
3. Identify recombinant progeny: In this example, offspring types 3 and 4 display traits not present in either parent and are therefore considered recombinant progeny.
4. Calculate the recombination frequency:
RF = (Number of recombinant progeny / Total number of progeny) * 100
= ((90 +120) / (400+390+90+120))*100
= (210/1000) * 100
= 21%
5. Convert the recombination frequency into map units:
Map units = RF *100
= 21% * 100
= 21 cM
Conclusion
Calculating map units is a fundamental skill in genetics and molecular biology. With a solid grasp of genetic linkage maps and understanding how to obtain data from breeding experiments, researchers can determine recombination frequencies and subsequently calculate map units. This knowledge is invaluable when analyzing chromosomes, gene sequences, and other critical components within genetics.